rs27404831 SNP Detail

Summary

• ID
  rs27404831
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:105683277 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAGATACAGC CTCAGATTAA CTGCATCTGA GATAAGAGTA
  TATGAGTAGT GGGTGAGCCC AGTGCCAGGA CTACTTTAGA GTAGTCAGTC AGTCAGCTGG
  K
  AGTCAGTGCA GCAGAGCTGA GTTCTTTCCT GAGTTCACGC AGCTCAGTGC AGCAGCAGAG
  GCAGCTGAAG TCAGAGAATA GGGAGAGCCA GAAGTTTAGA                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ	DBA/2J
ss37615655	NES09063384	PERLEGEN	MM_PANEL2	f	SNP	G	T	G
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ	DBA/2J
rs27404831					SNP	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37615655	NES09063384	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:105683277 () rs orientation: forward

Symbol	Name	Function Class
Elp4	elongator acetyltransferase complex subunit 4	Intron
Rr562298	regulatory region 562298	1850 bp proximal