CCCCAAGATC CCGAACCTCT CTCTCTCTTC ACGGACACTG ACTGAAGAGG CCAAGATGAG TACTGAGGTG AGCTGCCCTC AGGGGCTGTA AGGGACACCT TTGCTGCAGT TTCCAAACCT GTCCCCTAAG CTACCCACTT GCTCACGGCT GTGGGTGATA GAGGGAAAAT TATCTCCCTT GAGTTTTATC TGTTCCTGCT R TGGGTCACTA TGCTGCCTCC CCCGCCCCTT TCAGTTCCTA GCCATGAAGT GAGGAATCTC CCTGTGCTGT GTGCTCCTGG CATAGTGGGC TTTGCCTTCC AAGCCCACAC AACGAGGCCT ACTAATCCGT GATTTCACCC ACTTAAAATA GCCTCTGCCC TCGCCCGACA CACCCCAAAG AGTTTAGAAA CATTAGCCCA R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss37630515 | NES09015137 | PERLEGEN | MM_PANEL2 | f | SNP | A | A | A | A | A | A | G | A | A | A | G | A | A | A | A |
SNP Consensus Information | ||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
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rs27416389 | SNP | A | A | A | A | A | A | G | A | A | A | G | A | A | A | A |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss37630515 | NES09015137 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr2:126922712 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Blvra | biliverdin reductase A | within coordinates | ||||||
Rr38146 | regulatory region 38146 | 1289 bp proximal | ||||||
Rr55562 | regulatory region 55562 | 111 bp distal | ||||||
Tssr19977 | transcription start site region 19977 | 1867 bp downstream | ||||||
Tssr19978 | transcription start site region 19978 | 581 bp downstream | ||||||
Tssr19979 | transcription start site region 19979 | 544 bp downstream | ||||||
Tssr19980 | transcription start site region 19980 | 530 bp downstream | ||||||
Tssr19981 | transcription start site region 19981 | 295 bp downstream | ||||||
Tssr19982 | transcription start site region 19982 | 262 bp downstream | ||||||
Tssr19983 | transcription start site region 19983 | 212 bp downstream | ||||||
Tssr19984 | transcription start site region 19984 | 764 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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