rs27445641 SNP Detail

Summary

• ID
  rs27445641
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:86488573 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAGTAATAAA AAGAAGAAAG CAAGCTAACT GTGTAGCACA
  AAGATAATAG GAGACTGAAT TATGCTCTGC AACAAAATTA ACTAACATTT TTGGTCCAAT
  K
  GCTGTAGAAT ATCCAAGATC AGTGAAAGCC AGATGTTTGA GAAAAAAGTA CATGGGTGTG
  TGGAGACTGG AGTCCACATT AGTAATAATG ATGATGCCTA                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	PWD/PhJ
ss37612271	NES09111018	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	PWD/PhJ
rs27445641					SNP	G	G	G	G	G	G	T	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37612271	NES09111018	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:86488573 () rs orientation: forward

Symbol	Name	Function Class
Or8k38	olfactory receptor family 8 subfamily K member 38	Coding-Synonymous