rs27445643 SNP Detail

Summary

• ID
  rs27445643
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:86487195 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GATTCTAGTT CAAACTTGTG CATATCATGA TTAATCCTAA
  GGAATAACTG TATTGCATTA GATGAACAGT AACTGGTAGT TTCTCTTGTG CACAAACATC
  M
  CATGGATTAC ACAAGATCAG ATGCTTCATT ATCTTTTGCC TACTGAAAGG TCAAATATGT
  ACAGTGAGCA GTTTCATATA CAATAGAGAG AACACTTAAG                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss37612273	NES09111016	PERLEGEN	MM_PANEL2	f	SNP	A	A	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs27445643					SNP	A	A	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37612273	NES09111016	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:86487195 () rs orientation: forward

Symbol	Name	Function Class
Or8k38	olfactory receptor family 8 subfamily K member 38	mRNA-UTR