rs27484635 SNP Detail

Summary

• ID
  rs27484635
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:110257645 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCTTCAGT AGACTAAATA
  CTTCCAAGTG ACATGAAATG GGGAGTAAGG AGACTAGACT TAGCAACAGT GAGGTCATCG
  GTTACTTTGA TATGAGAAAA CTGATAATGG GAAATCCAGG TTACCTATCT TCTAGTTTAT
  TATGCCTTCT CAATACTTAT TTACTGGTTA ATTTTAATTG CCAGTCTGAT ATAATCTTGA
  Y
  TCTAGATTCC AGAATAAGCT GGTAAAGGAG TGTTAAGAAA GAATTTTCTA GATAATGTGA
  GCATGCATGT CATTAGGAAT TGGTTTAATA TGATGTCCAT GTAGCAAAAT AGTAGTAGGT
  TATTCCCAAT GGAAGTAGCA CAAATTGGTC TTGATGGGTG AAAAAAGGAC ACAAAGTTGG
  GTGGATGGGT GAGGGGAGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37708657	NES09222263	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	C	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs27484635					SNP	T	T	T	T	T	C	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37708657	NES09222263	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:110257645 () rs orientation: forward

Symbol	Name	Function Class
Agbl4	ATP/GTP binding protein-like 4	within coordinates