rs27503458 SNP Detail

Summary

• ID
  rs27503458
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:129506917 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCTCCACTG AGCTCTCAGA GCAGACGTGG AGGCTCAGGC
  TGAGTTGGAA GCTCTGATCT CACTGTTCTC CTGCTAAGGA AGACAGTCTC ATCTTGCACA
  S
  TCTCATCTTG CAGAGATGAC CCTAATCTAA CAGGAGTTTC AGATGCTAAG TGGTAGGCAC
  ATTTAGTGTC TGGTGATGGT GGGGATTGCA GCAGCAGCTC                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ
ss37718902	NES09232961	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	G	G
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ
rs27503458					SNP	C	C	C	C	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37718902	NES09232961	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129506917 () rs orientation: forward

Symbol	Name	Function Class
Dcdc2b	doublecortin domain containing 2b	within coordinates
Rr600294	regulatory region 600294	1123 bp proximal
Tssr43540	transcription start site region 43540	1137 bp downstream