rs27563035 SNP Detail

Summary

• ID
  rs27563035
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:134159362 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACACACCT CTTCTCCAGC
  TAAATGCATT ACCGGGTCTG TTCATACAAA GAGCTGTTTC TGTTGAAAAC ACCACGAGGT
  CCAGGCAGTA AAACAGCAGT AGAAGACAGG CTTCACCCAT CTGTCACTCA TCCATCCATC
  CATCCATCCA CCTGATATAA TAGGAGTGTC TCCATTAGCT GAGGGAAACA CTACTTAGAC
  W
  TGCTTGGAAA TTAGTGATCT CACAGTTCTG AGTAGTATGC CCTAGACGTA TGTCAGACTC
  ACTTGGGAAC TGTGGACAGA GATGCTGAGG ACTCATCTGG GGTTCTGGAG ATGCTGGTCC
  CAGAGGATCT GAGGTGGGCC CAGATCGATG GGATATGCAG ACACTCAGCT GAGGTCAAGA
  CCCCTGCAGT GACTTAGGCC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss37761766	NES09157803	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	T	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs27563035					SNP	A	A	A	A	A	A	A	T	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37761766	NES09157803	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134159362 () rs orientation: forward

Symbol	Name	Function Class
Gm30453	predicted gene, 30453	1667 bp downstream