rs27572730 SNP Detail

Summary

• ID
  rs27572730
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:134528406 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTGCAGGGA GGCCCTGGAG AGTCCAAGCG
  CTCTGAATTT TGTCACAGAT TCAAGAAGCA ACACCCCTCA GGGCTGATGG CAGAGCTGGG
  GGCTGATGCC TACCATGTGG TACGCGTGGC CAGACCACAG GGCTCCTGGT GGACCACAGA
  R
  CAACAGGGGT GGCTTTCCTT GGCAAGTGCT TGAgggctag ggatggctaa gtggttaatt
  acgatacaaa cctcagaaca ggagctgggg gtcctcagaa gccacacaag gaccacgtgc
  acaccttcag tttcaggccc tggaggcaag                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss37760154	NES09147178	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A		A	G		A
ss321349614	CHEV_4_134357010	CHEVERUD	SCREENING_POP	f	SNP									A			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs27572730					SNP	A	A	A	A	A	A	A	A	A	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37760154	NES09147178	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134528406 () rs orientation: forward

Symbol	Name	Function Class
Maco1	macoilin 1	1664 bp downstream