rs27617264 SNP Detail

Summary

• ID
  rs27617264
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:171955738 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAACGCTAT CTTGTATAAC
  TTGCAGTAGG GAAAACATGA GACGAGATGC CCCTTCGATA CGTCGTCCTC AGTCCCACTT
  CTAGGAAATG AAAGAGCTGG AGTTTTTGAT CCAGTGTAAA CTGTATTTTG AGTTTGCTTT
  GTGGCACCAT GAAAGACCAC ATGATAGACT GTTCCTGTGC CTCAGCCCCT CTCAGCTGGA
  R
  GAGCTGGCGT GTAAACGTGG TGGCAGACGG GGCTTCTGTT TTGAAATACA AATTTGGTGA
  GATCCAAGCA CAGCTTCGTT TTCCGAAGGG GCTGATTAGT GAGCAAATCT CCATTAACAC
  GGGACTACGC CTGAATCAAA GCACCCAAAT GTGCATGTGT GGGCGCTGAC TGTGAGCATC
  GAGGCCCAAC ATGGGAAAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37810075	NES08701912	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs27617264					SNP	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37810075	NES08701912	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:171955738 () rs orientation: forward

Symbol	Name	Function Class
Rr571605	regulatory region 571605	1945 bp proximal