rs27628755 SNP Detail

Summary

• ID
  rs27628755
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:169728743 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             CTAGTTTAGA GGGGAAGCAG GATACAATGT ATCTAAGAGA GATGAAGCTC
  K
  TGGTTGTTCC TAGAGCTCCA GGACTCACGG TTCCTTTAGC AACCTAAGGC           
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	DBA/2J	MOLF/EiJ	PWD/PhJ
ss37819804	NES08714154	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	T
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	DBA/2J	MOLF/EiJ	PWD/PhJ
rs27628755					SNP	G	G	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37819804	NES08714154	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:169728743 () rs orientation: forward

Symbol	Name	Function Class
Rr374253	regulatory region 374253	242 bp upstream
Tshz2	teashirt zinc finger family member 2	within coordinates
Tssr27898	transcription start site region 27898	1200 bp downstream