rs27636372 SNP Detail

Summary

• ID
  rs27636372
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:169344434 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCACCGAAC ATGTCTATCA
  TTTCTGAGGC ATGTGGGAAC CACCCAGAAC ATCACCCTGG TTCCTTTAGC CATCACAGTC
  CCTAAGAAAG TCAACGCTGT GTGGGTTTTC CTGCCCGGTG AAATGGTTTC CTTGTTCCTA
  ACTGGGCCTT ATGTCCTTGG GAAGAAACTA AAAAAAAACC TGAGTTGCCT CCAGTTTAGG
  R
  GATGCTGAAG TGGGAGACTA GACAGATGTG GGTTTCTGAA GGAAAGAACG ATTTGTCCAG
  CATACTGCCT ACCTTCCCTG AAAAAGAAGT GAAAGAGAAA GAGAAGGAGG AGGAGGAGAA
  GGAGGAGGTG GAGAAAGAGA AAGAGAAAGA GAAAGAGAGA GAGAAAGAGA AAGAAAAAGA
  AAAGCTCTCT GACAAAAGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37822203	NES08721317	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs27636372					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37822203	NES08721317	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:169344434 () rs orientation: forward

Symbol	Name	Function Class
Gm14249	predicted gene 14249	within coordinates
Rr571204	regulatory region 571204	316 bp distal
Rr571205	regulatory region 571205	231 bp proximal