rs27684273 SNP Detail

Summary

• ID
  rs27684273
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:178252854 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTGA TCCTGATCTG AGGTTACTCA
  K
  TCCTGTTTGC TAAACACTAC CAAAT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
ss37847103	NES08693580	PERLEGEN	MM_PANEL2	f	SNP	G				G	G		G	G		T
ss45249232	mCV22747739	ABI	CRAMUS_MOUSE	f	SNP		G	G	T		G
ss148366015	ENSMUSSNP3495207	ENSEMBL	ENSEMBL_Sanger	f	SNP		G				G
ss320628440	CHEV_2_178345766	CHEVERUD	SCREENING_POP	f	SNP							G			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
rs27684273					SNP	G	G	G	T	G	G	G	G	G	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37847103	NES08693580	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:178252854 () rs orientation: forward

Symbol	Name	Function Class
Gm74757	predicted gene, 74757	within coordinates
Rr572435	regulatory region 572435	270 bp distal