rs27704310 SNP Detail

Summary

• ID
  rs27704310
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:9503249 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGGAAGAA AGGCAAACGT
  CCCCCACTTG CTGTTTGCTG AAGTTCAGAG AGGAATGCAA GAGGTTTTTT GTTTTTGTTT
  TTCCTAGTGC TGAATGCAAG GAGGTGAGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG
  TGTGTCTGTG TGGTGTGTGT GGGGGGGGGG TGCCAGAGGG TTATTTTAAC CTACAGCTTC
  R
  GCTGCTCTTC GCTGCTGGGT TTGGAATGTG CTAATATAAC TTCTATTCAT GGGTGTTTAC
  ATCTAAACTG GCCATGATCA AACTGCTAAT CTCAACAAGT TGCTAATCTC AGAGAGTGGG
  GTACAAGTAA TGTTTTCTAT TTTCAACCTA CGAAAGGGAT TATTAGTCCA TTTTTATATA
  AATTTTTAAG CTAAATGTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37856347	NES08654612	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	G	A	A	A	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs27704310					SNP	A	A	A	A	A	G	A	A	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37856347	NES08654612	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:9503249 () rs orientation: forward

Symbol	Name	Function Class
Asph	aspartate-beta-hydroxylase	within coordinates
Cpgi14017	CpG island 14017	388 bp distal