rs27766095 SNP Detail

Summary

• ID
  rs27766095
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:23625189 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATAAAGCAT CTGGCACCTC
  AGCTTTGTTC TCACTTTTCA TCCAGCTGTT GTGTATCCTG GAAGGACAAC CTCATTCTGT
  GCTTAGAGTT AAAAAAGTAG AAAAATGGCT GACACATGAG CACTGCCAGC CCTCCAGAAA
  GCATGTCCAA CGCTATAGGT TCAGACTTGA TTAATATCTG TGACAAAAAC AACTTCCACC
  Y
  GCAATGTCTT TAGCATAGAA CTGCTACTTT CAAAGCACAT GTTGTAGGAC ACAGAAACTA
  ATTGGCAGAC TGCAAGGAGC ACTGTATTCT ACTAATTGAT AGCCTGGAAG ATGTTCCATA
  GACCCAGGAA ATAAAATTCC ATGAGATACC CAAATCAATC CCAGCAGCAG AAGTAGTCCA
  GTGCTATGCT CTCTGGTCGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss37906354	NES08620324	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs27766095					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37906354	NES08620324	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:23625189 () rs orientation: forward

Symbol	Name	Function Class
Gm56133	predicted gene, 56133	1467 bp downstream
Rr376229	regulatory region 376229	within coordinates