rs27766100 SNP Detail

Summary

• ID
  rs27766100
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:23623876 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTATCATGT TGCCGCAGTA
  CTTTTATAAT GAGAAATGAT GATATGTGAA ATTACTATGT AACTAAAGAC ATACTATTTT
  TGGGTTAATC TGAAAAAAGG AAGAACTATG TAAATTATTG TTCTCATAAA TAATTAATAT
  TAGAATGTTG AACAGGGTTC TGCGTGAGAC TGAGTTGAAT GTGACTTGAT TCTTTCCTTG
  R
  GGAAACCCTA ATTCTATGAC TCTCCAGATC ACTGCTTTTT CACTGTAAAA GGTCAAACAG
  CATTCATACT GGGCATTACC ATTGGGCTAA GTGTTGAGTA GTTCATTGGT ATTAGCATAC
  AAACATTTTT CAATTTTTAT ATGTCTATGG GGTAAATAGT CCCATTTTAT ATGTAAGTTA
  TATAAACTCA GAAATTTTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	WSB/EiJ
ss37906359	NES08620319	PERLEGEN	MM_PANEL2	f	SNP	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	WSB/EiJ
rs27766100					SNP	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37906359	NES08620319	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:23623876 () rs orientation: forward

Symbol	Name	Function Class
Rr376229	regulatory region 376229	1007 bp upstream