rs27773310 SNP Detail

Summary

• ID
  rs27773310
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:26351478 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATAAATTT TTTTCATGAA
  CTGGCCTAAC TCAGTAACCC AAGAGCACCA CCTTTGGTGC TTTCTACTGT CATTTTATTA
  CTATAACAGT TCCAAATACC ATAAAGTACT TAAGGTTTCT CTTATCCCAT TATGAAAATA
  CCAGCAATGT TTGCATTTGA TTATCAGCAA TGAATGGTCT TCTTATTTCC TATACCTAGC
  M
  AAATGCTTGC ATTTTCAGCC AGCATTTTCT CATCTCTATT TTAATGGGTC TTCCTCTGTT
  TCCTGAATAT CACATGCCTC TCCTCCACTG CTTTTTCCCA AACCTGGCCA CAAAGTGTCA
  TTTAGTAACT TTAAATGTCA TTGTTCCTCT CATCTGGAAA GCAAACTCAC AGATCAAGGG
  AAGCCTGTTT CCTGAAGTAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	FVB/NJ	NOD/ShiLtJ	PWD/PhJ
ss37923339	NES08601794	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	FVB/NJ	NOD/ShiLtJ	PWD/PhJ
rs27773310					SNP	A	A	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37923339	NES08601794	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:26351478 () rs orientation: forward

Symbol	Name	Function Class
Rr376252	regulatory region 376252	1886 bp upstream