TTTCTGACTC CACAGGAAAA GGGAAGTGAA GAAGATGGGG TCCCAGGTGC TGCAGCTGTC CTCCTTCTGC ATCAGAGGAT GCACGGGAAG GATGCGAGGG Y GCCTCTCCCT GGCAAGGCAG GAGGCACCCA GTTCCCATTC CTTCTTGGTA GGAGCCAGTT TCTTATCTGA TTTATTTGCC ACCCTGGCGC TCTCCTCATC Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | AKR/J |
BTBR T<+> Itpr3 |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss37996802 | NES09424745 | PERLEGEN | MM_PANEL2 | f | SNP | C | C | C | C | T | C | C | C |
SNP Consensus Information | |||||||||||||
SNP | Consensus Type | AKR/J |
BTBR T<+> Itpr3 |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
||||
rs27848369 | SNP | C | C | C | C | T | C | C | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss37996802 | NES09424745 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr4:45639553 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm12408 | predicted gene 12408 | 383 bp upstream | ||||||
Rr591433 | regulatory region 591433 | within coordinates | ||||||
Rr591434 | regulatory region 591434 | 253 bp proximal | ||||||
Tssr37068 | transcription start site region 37068 | 1224 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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