rs27936075 SNP Detail

Summary

• ID
  rs27936075
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:78723141 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGTAGAAGG GAAACTCTAC TTGATTGAAC TCCAAAGTGG
  AAGAGTTAGT TACTAGTCTC CTGGGAAAAC AAATATTGTC TTGCAGAGGA AGCTGCAGTG
  R
  TTTGGTTTGG TTTATGGCAC TTGGGATCAA ATCCAGGGCT GTGTTCATAC TGGACAAGCT
  TGTTGCTACT GCTAGTTCCG CACTTTGCAC CTGCAGGGGC                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss38095595	NES09256200	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	G	A
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs27936075					SNP	A	A	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38095595	NES09256200	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:78723141 () rs orientation: forward

Symbol	Name	Function Class
Gm51431	predicted gene, 51431	472 bp downstream
Ube2e3	ubiquitin-conjugating enzyme E2E 3	within coordinates