rs27984448 SNP Detail

Summary

• ID
  rs27984448
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:74072214 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAAGTTCCA AATTTGTGGC
  CACTAATGAC AGGGCCTTCC ATTTCTTTTA CACTTACTAA CTCCCCAAAC TTCCTCAAGC
  AGAAATTTAC TAACTGAAGC TCTTTGATGG AGTATTAAGT GGTACACAAG TACATTTTAA
  GGACTCATTA GATGTTGATA AAAATGATAG CATCTTTTGA ACACAAGCTG TCCTCTTTCC
  R
  TTGCTCAGGT ACCATCACTG GGGTTAGCGG CACCAGAACA ACTGGGCTGC CATCTGCACT
  CGTGAGTGTG AAGAGGAGCT GAAAGTATTT TAATAAACAG GCAGCTTCGG AGGCTCTGTG
  GACTCCCAGA CCACAGGCAC TTTGTGATCC TCACATAACA TGACACATTT GGAAAAGGAC
  TGGGCAGTTT TCTTTCATCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38114273	NES09267524	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs27984448					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38114273	NES09267524	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:74072214 () rs orientation: forward

Symbol	Name	Function Class
Gm75169	predicted gene, 75169	within coordinates
Rr559294	regulatory region 559294	1800 bp distal
Rr559295	regulatory region 559295	1787 bp proximal