rs27985191 SNP Detail

Summary

• ID
  rs27985191
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:71440919 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGATAAAATA CCTTTTCTTG
  CCTTAATTGT GCTTCTGCAG TTCCGATTTG TTTGAATTTA CAAATATCTT ACTTGTAAGC
  GGGATTGAAT TTGACAATAC ACCCTGCACC CCTCCTGTGG TAAGACGTGG GGTCTTTTGT
  TCCTGAAATT CATCCGTAGT TAATAGAAAA TCATTTTGGA CCAGGTTGCC AGCATTTTGA
  R
  CTGTTTGTCT GTGGCTGAAT GAAGTCCAGG CTGCAGAGGT GTCCAGGAAG TAGCCATATG
  TGAATGCAGA TAGTACAGGT GTCACAGAAT GACCAGGGAG GGAGAGGACT CAGAGGCTAC
  TTTTTAAGCT ATTCCTTCCT CAGATAAGTA GCTGCAGCCC TGAGTGTTGA AAGGAGGGAA
  CTCTGGAAAA AATCTACATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	CAST/EiJ	DBA/2J	KK/HlJ
ss38123123	NES09285824	PERLEGEN	MM_PANEL2	f	SNP	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	CAST/EiJ	DBA/2J	KK/HlJ
rs27985191					SNP	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38123123	NES09285824	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:71440919 () rs orientation: forward

Symbol	Name	Function Class
Gm74658	predicted gene, 74658	within coordinates
Rr558783	regulatory region 558783	1514 bp distal
Rr558784	regulatory region 558784	220 bp proximal