rs27995868 SNP Detail

Summary

• ID
  rs27995868
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:60025124 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGCAAATGCC CTGTAAAGGC ACACCTAGGA GTATGTGTCC
  TAGGTGACTC TAAATCTAGT CAAGCTGAAA ATGATGATTG CTATGCCATT GCACACAGAC
  W
  TGCTATGCCA TTGCACACAG ACGTGCTGTT CTGTTTATCA TCTGTTGGTC AATGCACACA
  GGTTCCACAT CTGAAGCTAC TATGGATATT TTATCTTGGA                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	PWD/PhJ
ss38162387	NES09324501	PERLEGEN	MM_PANEL2	f	SNP	T	A	A	A	T
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	PWD/PhJ
rs27995868					SNP	T	A	A	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38162387	NES09324501	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:60025124 () rs orientation: forward

Symbol	Name	Function Class
Baz2b	bromodomain adjacent to zinc finger domain, 2B	within coordinates
Rr373232	regulatory region 373232	727 bp upstream
Rr557610	regulatory region 557610	1059 bp proximal