rs28028968 SNP Detail

Summary

• ID
  rs28028968
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:86002316 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAGAATGA ACTCTGTCAC
  CTGGGTGCAG TTTATCTGAG CCATGAATAT TCATGAGATC TATGCAGAAA TCAGTAGAAA
  AGATCATAAT CAACATTTTG ACAAGAACAT TTATATTAAT GCAGTGAAAC ACATTACACT
  GTTAACATGA AAATTATAGT TTAATTTTAA ACTGATTAGC TCAAAGCTTG TCCATCAAAT
  W
  TTTTATGCAC CAAGCCATCT CTACAAACCC TATAACGCAA TTCTTTTCTA TAAAATGAAT
  TGAAATAGAA AATTTTGAAA ATAATTTTCT ATCATGTAGC ATTTTCCCAA TAAACATCTC
  AAATTAGATA AAGAAATTAT CATATGAAAC CGTTCTGAGT TACTTAAATA TGTTAGTCAG
  AAAGAAAAAC AGGAACTGCA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss38168791	NES09241320	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	T	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs28028968					SNP	A	A	A	A	A	T	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38168791	NES09241320	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:86002316 () rs orientation: forward

Symbol	Name	Function Class
Or8u9	olfactory receptor family 8 subfamily U member 9	157 bp upstream