rs28030482 SNP Detail

Summary

• ID
  rs28030482
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:83481419 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGCT AAGGATCACC ATAAGTGCTG
  R
  TCATAAAATG AGAATCTCTA TAATT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss38175814	NES09394893	PERLEGEN	MM_PANEL2	f	SNP	A			A	A	G	A	A		A	A	A	A		A
ss45301586	mCV23818425	ABI	CRAMUS_MOUSE	f	SNP		A	G			G
ss146812228	ENSMUSSNP2014556	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G
ss320367691	CHEV_2_83491232	CHEVERUD	SCREENING_POP	f	SNP									A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs28030482					SNP	A	A	G	A	A	G	A	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38175814	NES09394893	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:83481419 () rs orientation: forward

Symbol	Name	Function Class
Rr44876	regulatory region 44876	1982 bp proximal
Rr397084	regulatory region 397084	1960 bp downstream
Zc3h15	zinc finger CCCH-type containing 15	within coordinates