rs28055652 SNP Detail

Summary

• ID
  rs28055652
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:60026064 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAAATTCAT TCTTTACATG
  TCAGTTTCTT TCTACTCTGT ATTGTTTAAA ATATTTTCTT TCCTTCCTGT CTTAGCATTC
  TTGAAATCAG TTAACCATAA ATAAAAATGT TTATGTGTCT GAAAGCAAGT AAAACCAGAA
  TGGCCAATAC TTTTATAAAA CTGATTTCTT TAGTTAGAAG AGGTAGTGAG AGAATACCTA
  M
  AACATTCCTC TGTTTCCTGC ACCTCTATCA CTGATCTACA CCCCTAGGAC AATCCTCTGC
  CTTTTAAAGA CAGGGCCTCA CTTGTCCAGA CTAGTCTTGA ACTTGGAGCT CTACTGCCTC
  TGCCTCCAGA GGGCGGCCAT CACAGGCATG TGCTAAGCAG GCTTTTCATA TGGGGCTAGG
  AATTGAACTC AGGTGTTCTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38162383	NES09324453	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs28055652					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38162383	NES09324453	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:60026064 () rs orientation: forward

Symbol	Name	Function Class
Baz2b	bromodomain adjacent to zinc finger domain, 2B	within coordinates
Rr373232	regulatory region 373232	within coordinates