rs28105256 SNP Detail

Summary

• ID
  rs28105256
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:96203307 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAGAGCTTT CCTGGAGAAT
  ATATGCCAGT GGGGATGGCT TTAAGGTTTT CCAGACTTGC CCTACTCCAG TTTCCTCTGT
  GATTTTTGTA TGCAGTTGAT ATGTGAGGCC TCAACTTCCA ATTCTAATTT TCAATACTTG
  CTGCATAGTT CTATATAAAT TAGTTGTGGT TATAATATTA CATCACAGAA ATCAAAATAT
  W
  GGTAACAAAC ATATTTTTAA AAACTATATA TCTATATAAA TAGATGGAAA ATAGATAGAT
  ATGATAATAT TTACCTTTTA ACCAATAAAG TAAAAAGGAT GGGCATGCAA AAAGCTCAGT
  AAATAAAGTG ATAAATGTAT AAACATGGGG ATCTGTGTTT TATCCCAAAA ATTCATTTAA
  AAAATCCAGG TATGGTGGCA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	NOD/ShiLtJ	PWD/PhJ
ss38251881	NES09553399	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	T
SNP Consensus Information
SNP					Consensus Type	AKR/J	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	NOD/ShiLtJ	PWD/PhJ
rs28105256					SNP	A	A	A	A	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38251881	NES09553399	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:96203307 () rs orientation: forward

Symbol	Name	Function Class
Cyp2j11	cytochrome P450, family 2, subfamily j, polypeptide 11	within coordinates
Rr376878	regulatory region 376878	28 bp downstream