rs28163076 SNP Detail

Summary

• ID
  rs28163076
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:108868757 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGCACTAGG ATTACAGGCT
  CGAGAGATAT AAACTCCATA CACACACGCA CACGCACACG CACACGTGTG TGTGTATGTA
  TAGTGTTTTA CCCACTGAGC CATCTCCCTA GTAGACAGTG TCTTTTGAAC CTCAAGGCTT
  GGCTGAACAG TACTTTGTTT CAGAGGCTTT CTCTGATTGT CTCCTAGGAT CTTTCAAGAA
  Y
  AGTCTGTGTT TACTTGCCAT TCTTAGTTTG ATGACCTTGT TATTATTACC AAACACTGTG
  GTCTTATACT TTTTTCTTGT AATGTAGCAT GATGTCTGAC ACACAGAGTT GTTAAACAGG
  TGTTTATTGA GTGAATGCAT AAAAGAGTAA AAAATAAAGA ATAAATGAGA GAAGGCTGTT
  ATAGACATCT GGCCATCAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38279108	NES09529713	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs28163076					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38279108	NES09529713	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:108868757 () rs orientation: forward

Symbol	Name	Function Class
Nrdc	nardilysin convertase	within coordinates
Rr376993	regulatory region 376993	1257 bp downstream