rs28171588 SNP Detail

Summary

• ID
  rs28171588
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:104221923 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACTTAGAG GCCATAACCC
  ACTATCAAAA CAGACATGTA TTTGAAAACT GCTAGGAATA AACCGGATTT AAATAGTATA
  CAAGTTACAG AAGGCACCGC TCTGTGTTCT TCCCTTTGGG GGAGTGGCTA TCACTCACTG
  AATTTATGGC AGGTAACCAC AGGTCTGGTT TCCAATCCTG GGGTCAGTTG TGTTAACTGA
  Y
  CCCGAGTGCC TGTCACAAGG ATCACAGGAA GACAGATGAC ATCAATCACG TGAGGGTGGA
  TGGCATATAT TCAGTAGCTT GCCTTTTTTT CCCAATTTGT GTTACTTATG CTATGTCTCT
  GTCATAAATG GACAGAGCTT TTAACATAGA CCTTGATGGA CAGAAGAAAC CCCGCCAAAA
  TGTGGCGAAT CAAAATGAAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	MOLF/EiJ	WSB/EiJ
ss38300218	NES09494544	PERLEGEN	MM_PANEL2	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	MOLF/EiJ	WSB/EiJ
rs28171588					SNP	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38300218	NES09494544	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:104221923 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14517	CpG island 14517	1904 bp proximal
Dab1	disabled 1	within coordinates