rs28211369 SNP Detail

Summary

• ID
  rs28211369
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:59528066 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCGG CAGGTCATCT GTGGTTGGCT
  R
  CAGTGGCTGG GGATACAGGT TAGGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
ss37194789	NES08427501	PERLEGEN	MM_PANEL2	f	SNP	G	G	A	G	A	A		G	G
ss132238289	ENSMUSSNP5911083	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss323698888	CHEV_11_59450742	CHEVERUD	SCREENING_POP	f	SNP							A			G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
rs28211369					SNP	G	G	A	G	A	A	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37194789	NES08427501	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:59528066 () rs orientation: forward

Symbol	Name	Function Class
A630028G03Rik	RIKEN cDNA A630028G03 gene	within coordinates
Gm33998	predicted gene, 33998	within coordinates
Rr448219	regulatory region 448219	783 bp distal
Rr448220	regulatory region 448220	within coordinates
Rr448221	regulatory region 448221	1237 bp proximal