rs28225455 SNP Detail

Summary

• ID
  rs28225455
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:82716702 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGATATAC ACGACAGCAC
  TGACAGATCT CACGTAGATC TGACGCTGGC TGAAAGAAAC ACGTGCCAAT GTATATGAAC
  TAAATGGCCA CATTCAAAAA GTGTGGGAAT TAGGATAGTG TATCCCTGCA TGGTGGCATA
  TCCCACAGTC CTACCTACTT GGGAGACTAA ATCATTTGAG CCCAAGAGCC TAAGGTCAGC
  Y
  TGGACAACCC AGCCAGACAG AACCAATCAA TCAGCTAAAG CAGGGACAGA GGTGGCACTT
  GGGGACAACA GGAGGGAAGA TGCATGGGAT CTTCTGCTAA TACTGTTTCT TTTTAACTTT
  TTCATTTATG TGTAGTATGT GTACCTGCTT GTCTGTAAGT GCCCATGAGC CCAATGCCCA
  CAGAGGCCAG AAGAGAGCAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	KK/HlJ	MOLF/EiJ
ss37143092	NES08457564	PERLEGEN	MM_PANEL2	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	AKR/J	KK/HlJ	MOLF/EiJ
rs28225455					SNP	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37143092	NES08457564	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:82716702 () rs orientation: forward

Symbol	Name	Function Class
Rffl	ring finger and FYVE like domain containing protein	within coordinates
Rr386369	regulatory region 386369	760 bp upstream
Tssr103583	transcription start site region 103583	1884 bp upstream