rs28250492 SNP Detail

Summary

• ID
  rs28250492
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:127741618 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATGA AACATGGAGT CCTGAGAGGC
  R
  TTCATGATAG TCCCACATAA TAGCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	C57BL/6J	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	SM/J	WSB/EiJ
ss37627615	NES09004010	PERLEGEN	MM_PANEL2	f	SNP	A	A			G		A		G
ss45328010	mCV23903757	ABI	CRAMUS_MOUSE	f	SNP	A		G	A
ss147544635	ENSMUSSNP6004494	ENSEMBL	ENSEMBL_Sanger	f	SNP	A			A
ss320501030	CHEV_2_127725434	CHEVERUD	SCREENING_POP	f	SNP						G		A
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	C57BL/6J	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	SM/J	WSB/EiJ
rs28250492					SNP	A	A	G	A	G	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37627615	NES09004010	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127741618 () rs orientation: forward

Symbol	Name	Function Class
Acoxl	acyl-Coenzyme A oxidase-like	Intron
Rr564612	regulatory region 564612	1664 bp distal