rs28265003 SNP Detail

Summary

• ID
  rs28265003
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:162695365 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCCCATGCC TTTAATCCCA
  GCACTTGGGA GGCAGAGGCA GGCAGATTTC TAAGTTCAAG GCCAGCCTGG TCTATAGAGT
  TAGTTCCAGG ACCCAGGAAT ACACAGAGAA ACCCTGTCTC GAAAAACTGA GAGAGAGAGA
  GAGAGAGAGA GAGAGAGCGC TCAACATCCA AAAATCTTAG CATCCTTAGG GACCCAGGAA
  S
  TAACAGATAC CAGGAGGTGG CTGTACTTAG TCATATGTGA GGTACAAATA TCACTAGGGT
  TAGCGGTAAC CACAGTGAAG GCTCAAATGT GTTTGGTCAC AAAAACAGAC CAGCAACATG
  AGAGAGATAA AGGAAGGCGG ATGTTTATGT GGCTATTAAC AACCTGGTTA AAGAATACCA
  CAGCCAAATT TATCAGCCAG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37523728	NES08879098	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	C	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs28265003					SNP	G	G	G	G	G	G	G	G	C	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37523728	NES08879098	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:162695365 () rs orientation: forward

Symbol	Name	Function Class
Rr569228	regulatory region 569228	23 bp proximal