rs28311850 SNP Detail

Summary

• ID
  rs28311850
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:17654724 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATAAC TCAATGTGAT CCTTTACAAG
  Y
  AATGCACTTG ACATTCTGGT ATGGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss37883380	NES08628483	PERLEGEN	MM_PANEL2	f	SNP	T		T	T	T	C	T		T	C	C	C		T	T	C		T
ss45658373	mCV23722509	ABI	CRAMUS_MOUSE	f	SNP	T	T	T					T		C
ss146067447	ENSMUSSNP3031261	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T							C
ss321050172	CHEV_4_17581871	CHEVERUD	SCREENING_POP	f	SNP													C				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs28311850					SNP	T	T	T	T	T	C	T	T	T	C	C	C	C	T	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37883380	NES08628483	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:17654724 () rs orientation: forward

Symbol	Name	Function Class
Gm11851	predicted gene 11851	1951 bp downstream