rs28318045 SNP Detail

Summary

• ID
  rs28318045
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:98726743 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCAAAGAGT TCGTCACATC TCGCCTCCTG GATCTTCTCT
  AGTTCTACTT GTCCGATAAT GGTCTCATCG ATCTCCCAGA TCTTATTCAT CCACTATCCA
  K
  AGCATTGCCC AATCTTACCC TCTCCATTTC TTACTCCCTT TATCGCCCCC CCCCCCCCCA
  GTGGTGACTC CCAGCAAGAG GAAAAAAAAA AAAAAAAAAC                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss38241972	NES09555054	PERLEGEN	MM_PANEL2	f	SNP	T	G	T	G	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs28318045					SNP	T	G	T	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38241972	NES09555054	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:98726743 () rs orientation: forward

Symbol	Name	Function Class
Rr376900	regulatory region 376900	1874 bp upstream
Rr595795	regulatory region 595795	1645 bp distal
Rr595796	regulatory region 595796	504 bp proximal
Rr595797	regulatory region 595797	1840 bp proximal