rs28322926 SNP Detail

Summary

• ID
  rs28322926
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:45624881 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGGTGCTG AGTTGAGGAA
  GGCAGGTTGA GGCTAACAAT AAGAGAGCCT AGGGGCTTGC CTAGTATTCT AGATCCAGTC
  AAGTTGACAC CAATATTAAC CATCATAATC ACTGAGTCAT CTTATAATTT CCTAGAACTT
  GATTGTGTGT GTGTGTGTGT GTGTGTGGTA GTATGGTCTT ATGATCACCC GTGTGTCTAT
  R
  TGCATGCCTC CATGTATCTT TGATGGTGAG ATTCACAAAT GAAGTCTCCT TTATAGCTTT
  CTATTTATTA TTTTGAAACA GGTCCTGTTA CTCAGCATTC TGCCAGGTGG TATTGATGCC
  TGAAATTAAC TGACAATTTA AAGCAATCCA GAACCACCTG GAAGATGGGG AGGTCGGCCG
  GCCTATGAGG TAGGTATTCG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	LG/J	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
ss38093052	NES09371052	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G		A	G		A
ss320276491	CHEV_2_45590389	CHEVERUD	SCREENING_POP	f	SNP						A			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	LG/J	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
rs28322926					SNP	A	A	A	A	G	A	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38093052	NES09371052	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:45624881 () rs orientation: forward

Symbol	Name	Function Class
Gm13465	predicted gene 13465	within coordinates
Rr556487	regulatory region 556487	1496 bp proximal