rs29030937 SNP Detail

Summary

• ID
  rs29030937
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  ChrX:77496060 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTAGTTAAC TGATATCTTT
  AATTAGAAAA CATGCATGTT GCTGTCTATC ACATACACTG TCTATGAATC CTGCCTTTTC
  AATTTTTGTG AGTAATGCTC TCTTTATGGG TGATGTGGTA GAAGTTAGTT GTACACAAAT
  TGGATGGCAC ACATTTGGTT ATATGCATAC ATGTGTATTC CTTACAGTAC ATAAAGACTG
  M
  CACCGACAAT GTCTTTCCTT CATGTTTCCT CTTGTAAAAA CTAACACAGA TAATGATTTT
  ATAGTAAGAG ACAAAACCAA AGATAAATCA AACCAGTAAA TGTGAAGTGG TGTGCTCTAA
  GAGTCTAATA AAATAAGTCA ATGCACATTT ACGTAGTATT AAAGTGCTAG AAAGTTTTCC
  ATTAGTATTT TAGAAATGAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38357909	NES09687257	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	A	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29030937					SNP	C	C	C	C	C	C	C	C	C	C	A	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38357909	NES09687257	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:77496060 () rs orientation: forward

Symbol	Name	Function Class
Prrg1	proline rich Gla (G-carboxyglutamic acid) 1	mRNA-UTR
Tssr163702	transcription start site region 163702	199 bp downstream