rs29030943 SNP Detail

Summary

• ID
  rs29030943
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  ChrX:77494029 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGTTTATA AAACCAGAAG
  GGGTAGCAAA GGGAATTTTA AAAGTATGAA ACCTAAACTG TACTCAAACA CAACAAAAAG
  TGTAAAATAA AAGTTCATGA AGTAGTATTT TGATTATACT TTTCTTATAG AAAAGCTGCC
  ATAAAATTTA TGGTTAGTAC AGCTATTAAT TACTATGAAA TAGTGTTTTC TCTGACCAAC
  W
  ATCTAAACAG CTGTCATTAC TAATCAATTT CTTTAGCTTC TATTTCAAGA ACCATCATTC
  ATTGTTCTAC TTCATTCAGA CAGTGGTAAA TCCAATATTG AGACTTCAAA ATATAAAGTA
  ACTTTACAAG AACAAAAACC TAACTTAGTG ACAGGATGCC TTGCTCTTTT GTCCAATCCT
  GTAGTTCTTA AAATTTGGAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38357915	NES09687247	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	T	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29030943					SNP	A	A	A	A	A	A	T	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38357915	NES09687247	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:77494029 () rs orientation: forward

Symbol	Name	Function Class
Prrg1	proline rich Gla (G-carboxyglutamic acid) 1	mRNA-UTR