rs29034677 SNP Detail

Summary

• ID
  rs29034677
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:74958765 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTGTATGTA TAGAAAATGC
  AGATATGTAA GTACATGTAT GATACATTGA ACATTTGGAA GTAAGAGATC AAACATTTGG
  GAAGTCAGTT CTCTCCTTTC AGCTTTATGT GCGATCCAAA TATCAAACTC ATGTCCTCGG
  GGTGGCCACA TCCGGCTTCG TGGCTGAAGT ACAGTAGGTG TCCCTTAAAG GACGCTGTCG
  R
  GATCTTACCA TGATCTGAAT GGTCTATCTG CACTCCCATT CCTGAAGGAC CCATACAATG
  CTTTCTAAAA CTAGCAAGTC TGGAGATCAT TGCTACTCTG CGTCGAGGAG TCCATGCTTC
  AGTCGCCTCT GCCAGCTCCA TTGCAACCAA GAAGACAGTG CAAGGCCCAC CATCCTCTGA
  GTACATTTTT GAATGGGAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38361409	NES09692537	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29034677					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38361409	NES09692537	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:74958765 () rs orientation: forward

Symbol	Name	Function Class
Gm14715	predicted gene 14715	972 bp downstream
Oat-rs1	ornithine aminotransferase related sequence 1	57 bp upstream
Tssr161359	transcription start site region 161359	47 bp downstream