rs29034726 SNP Detail

Summary

• ID
  rs29034726
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:74957390 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTAACACCC CCAGGGTGAT
  GAGTAAACTT GGGACCCTAT TCTCTTAGAG TAATAAACAC CACAAAAGGA TTAATGCACG
  TTATAAATGA AGTAGAATGG ATCTTTAGAG AATGTGTTGG GGGGGGGGGA AGGGGATTCC
  TCTGGGCTGA AAGTCTCACG GACTCAGCTT CCTTCAATAA CTGACCAAAA TGACTTATCT
  K
  TTTCATGAAG CCAGCCTCAG CAACAAGATT TTAAACTATT CCAACTCAAA AAAGAAAAGA
  CATGGGATTC GGTTGTCTCA ATAATGAAGA CAGTAACATT GTGCCTCAGC AGCTCATGGA
  TAATTGCAGT GCTCCAGCCA GAAGACCTCC TCTCTTTTCC CCAAGTTGTG GAAATGAACT
  AAAATAGACC TCAAGAAGAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38361418	NES09692666	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	T	G	G	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29034726					SNP	G	G	G	G	G	G	G	G	G	G	T	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38361418	NES09692666	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:74957390 () rs orientation: forward

Symbol	Name	Function Class
Oat-rs1	ornithine aminotransferase related sequence 1	1432 bp upstream
Tssr161359	transcription start site region 161359	1320 bp upstream