rs29035132 SNP Detail

Summary

• ID
  rs29035132
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:74004904 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGCCTTGCA AGTGATTCAA TTTAGCAGGA TAGCATGGGG
  ATGTTTTCTA GTGATTCTGT TTCCTGCTAA ATGGTGGAAC TCATGGAGCA AGGAACTATC
  R
  TTCTCTCTTA GGATGTAGAA GAGTAGTAAG CAGCCATGCC TACTGAGGGA CAAGGGGCAC
  AGGCTTTCTC ATTCTCTTCC CCACCCCCAC CCCAATTTTC                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38362768	NES09688517	PERLEGEN	MM_PANEL2	f	SNP		G	G	G	G	A	G	G	G	G	G	G	G	G
ss38362814	NES09688886	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	G	G		G	G	G	G
ss49762602	NES12394230	PERLEGEN	MM_PANEL2	r	SNP	C	C	C	C	C	T	C	C	C		C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29035132					SNP	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38362768	NES09688517	PERLEGEN	MM_PANEL	f	SNP	A/G
ss38362814	NES09688886	PERLEGEN	MM_PANEL	f	SNP	A/G
ss49762602	NES12394230	PERLEGEN	MM_PANEL	r	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:74004904 () rs orientation: forward

Symbol	Name	Function Class
Gm15363	predicted gene 15363	1651 bp downstream
Gm62199	predicted gene, 62199	1474 bp downstream
Rr692060	regulatory region 692060	1904 bp distal
Rr692061	regulatory region 692061	1781 bp proximal