rs29035719 SNP Detail

Summary

• ID
  rs29035719
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:73777476 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TACATACGGA TTTTGAACTG TAGCTGTTCA TAATTGTGAA
  CCAAGATGAC CAGGGATGGC TTCTAATTAA ACATGGCTTT TGGTTTTAGA ATCTACAGGC
  Y
  ATTAAGTGTT GTCGCCGAAA AGCTATTATT GAGGAAGCCA GAAAGCTAAT GGACTACTTG
  GAAAAGAGAG TTACTGAAGA AACTGTAAGT AGAATATTTT                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	PWD/PhJ	WSB/EiJ
ss38363021	NES09690545	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	PWD/PhJ	WSB/EiJ
rs29035719					SNP	T	T	T	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38363021	NES09690545	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:73777476 () rs orientation: forward

Symbol	Name	Function Class
Xlr4d-ps	X-linked lymphocyte-regulated 4D, pseudogene	within coordinates