rs29036127 SNP Detail

Summary

• ID
  rs29036127
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:74004605 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCCTTCTTTT TCAAACCGGA TACTCTTAAC TTAGGGGTAT
  CCAAACAATG GAATGTGATG CCAGATTAGT ATCATTTAAA CACGTGACAG GGAACAAATA
  M
  CAGAATGGTA CCTAATCAGT CACTTAGCTA GATATAGAAC CTGCAACTCA CCAGCAGCAG
  CTGCCTGATG CCATGTGAAG GAACAAACTG GTTTTGGATT                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	DBA/2J	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
ss38362770	NES09688514	PERLEGEN	MM_PANEL2	f	SNP	A	C	C	C	C	C	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	DBA/2J	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
rs29036127					SNP	A	C	C	C	C	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38362770	NES09688514	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:74004605 () rs orientation: forward

Symbol	Name	Function Class
Gm15363	predicted gene 15363	1352 bp downstream
Gm62199	predicted gene, 62199	1175 bp downstream
Rr692060	regulatory region 692060	1605 bp distal