rs29037273 SNP Detail

Summary

• ID
  rs29037273
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:72865769 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCTGACACT GTCACATAGA
  TATGCAAGCA GGTGGGATGC CAATGCACAT AAAATAAAGG CAAATACATT TAAGAAAGAG
  AGAGGCAGGG AGAAGAGTAC TCAATATGGA GGAAGTACAC ATGTTTAAGG ATCTTAGGAA
  GCAGAATTCA TTAATTCTGA AAACTACCTG GGTTTTAAAG CAAAAATTGC CTTCTGCTCT
  R
  AAGGAAACTC TCCTTGAGGC CTATATGAGT ATTCATCTCC CATAAGCTAT TCATTCAGGC
  TACCTGATAG ATCTCATTGT TTTCCATATA TTGTTTCTAT ATTCATTCCT TTTGTTTTTA
  CTTTATTTGA AAGGATAGTT CTTCCTTTAA AAAACATCTG GTCTCTAATT GGGTCAAGGA
  GAACCAGGAA AATGAAAGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss38364315	NES09692792	PERLEGEN	MM_PANEL2	f	SNP	G	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs29037273					SNP	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38364315	NES09692792	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:72865769 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22781	CpG island 22781	1246 bp proximal
Cpgi22782	CpG island 22782	1977 bp proximal
Pdzd4	PDZ domain containing 4	within coordinates
Rr8723	regulatory region 8723	431 bp proximal
Rr10008	regulatory region 10008	769 bp distal
Rr395204	regulatory region 395204	within coordinates