rs29037304 SNP Detail

Summary

• ID
  rs29037304
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:72863985 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AATGAGAAAG ACAAAAATGA AATTTAGAAA GCAATTCCGG
  GCTGGAGAGA TGGCTCAGCC GTTAAAGGCT AGGCTCACAA CCAAAAATAT AAGAAAACAA
  Y
  TCCAAGCCTG GCATATTGGC TCATTTACTT GACTTGAGTC AGGAGGACTG TTAATGAGCT
  CAAGCCCAGC CTGCTACATA GTAAGTTCTA GACTAACCTG                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss38364316	NES09692850	PERLEGEN	MM_PANEL2	f	SNP	C	C	T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs29037304					SNP	C	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38364316	NES09692850	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:72863985 () rs orientation: forward

Symbol	Name	Function Class
Pdzd4	PDZ domain containing 4	within coordinates
Rr10008	regulatory region 10008	816 bp proximal
Rr395204	regulatory region 395204	358 bp upstream