rs29037305 SNP Detail

Summary

• ID
  rs29037305
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:72863279 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTACACTAA AGGGCCTGTA
  AGAGATCTTA TCAAATAGGT TACAAATTTA CACAATCATC ACAATATGAA CAGAAAATCA
  AAATAACAAT CTCTCATAAA AATTTTTAAC AAACTCCAGA CAGAAGGGAG CTTCCTCAAC
  CTGCTAAGGC CAGTGTGGTG GTACACACCT GGGACTCCAA TACTAAGGCC GGAAAATCAA
  M
  AGGTTAGGGC CTCTACTTAA TAATATGATC CTGAATGATA ATAATAGTAG TAATAGTAGT
  AGTAATAAAA TAAGGCCAGG GGATAAAGAA ATGGCTCAGC AGTTCCAAGT ACTTGTTGCT
  CTTCCAGAGG ACCCAAATTT GATTCTCAGC ATCCACATTT TGGCTTACAA CTATCTGTAT
  GTAATCCTAG TTCCAGGAAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss38364317	NES09692896	PERLEGEN	MM_PANEL2	f	SNP	C	C	A	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs29037305					SNP	C	C	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38364317	NES09692896	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:72863279 () rs orientation: forward

Symbol	Name	Function Class
Pdzd4	PDZ domain containing 4	within coordinates
Rr10008	regulatory region 10008	1522 bp proximal
Rr395203	regulatory region 395203	1751 bp downstream
Rr395204	regulatory region 395204	1064 bp upstream