rs29037307 SNP Detail

Summary

• ID
  rs29037307
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:72863062 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAGAATGGG GGTGGCAAGC
  AGAAGCATCA GGAAAACCTC TGGGAAGATG CTTTGTAGCG TGGTCCCAGA CACATACTGC
  TTCCAATCTT TCCACCTTTC CTTGCTTCCT CAACATACAG TCATCGCTTT TGTCAGAGGG
  AAGTCTTACA TTTCACAAGC ATACTTACTC CTGCACTCCA TTCAGCCTGA ATAGACATGG
  R
  CATGAAGTTC TGACATCCTA CACTAAAGGG CCTGTAAGAG ATCTTATCAA ATAGGTTACA
  AATTTACACA ATCATCACAA TATGAACAGA AAATCAAAAT AACAATCTCT CATAAAAATT
  TTTAACAAAC TCCAGACAGA AGGGAGCTTC CTCAACCTGC TAAGGCCAGT GTGGTGGTAC
  ACACCTGGGA CTCCAATACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss38364319	NES09692914	PERLEGEN	MM_PANEL2	f	SNP	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs29037307					SNP	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38364319	NES09692914	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:72863062 () rs orientation: forward

Symbol	Name	Function Class
Pdzd4	PDZ domain containing 4	within coordinates
Rr10008	regulatory region 10008	1739 bp proximal
Rr395203	regulatory region 395203	1534 bp downstream
Rr395204	regulatory region 395204	1281 bp upstream