rs29037308 SNP Detail

Summary

• ID
  rs29037308
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:72862987 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CATCAGGAAA ACCTCTGGGA AGATGCTTTG TAGCGTGGTC
  CCAGACACAT ACTGCTTCCA ATCTTTCCAC CTTTCCTTGC TTCCTCAACA TACAGTCATC
  R
  CTTTTGTCAG AGGGAAGTCT TACATTTCAC AAGCATACTT ACTCCTGCAC TCCATTCAGC
  CTGAATAGAC ATGGACATGA AGTTCTGACA TCCTACACTA                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss38364320	NES09692913	PERLEGEN	MM_PANEL2	f	SNP	G	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs29037308					SNP	G	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38364320	NES09692913	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:72862987 () rs orientation: forward

Symbol	Name	Function Class
Pdzd4	PDZ domain containing 4	within coordinates
Rr10008	regulatory region 10008	1814 bp proximal
Rr395203	regulatory region 395203	1459 bp downstream
Rr395204	regulatory region 395204	1356 bp upstream