rs29051748 SNP Detail

Summary

• ID
  rs29051748
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:65069938 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTGATTTC CAGAGGAAAT
  TTCTAATAGG GACCACATGG GCAGTGGTCT TGTTGGGAGG AGGTGGTGAT GTGTAAGCAC
  TTTTGACCCG GTGACAATGG GAGGATTTGG CTAAGGTAGA GGGCAGAGAA GCTGTCTTGG
  TGGTCTGTGA GCCCACAAGG CCTTGGAAGG CAAGAAATTT TGCTTCAGCC TCCTAGGCAC
  R
  TTGGATTCCC AATGAGATAC TGCTAACTGG AGATGGATGG ATGAAGACAT GGACTGTGGT
  AGGAAAGGCT TCCTTGGAGG TTAGGTCTCA GGTTAGAAGA TGATGACTGT GGGGTGGGGG
  AGGCCATGTG TGGCATAATG TTGGTGTGAG GTTCAAGGTT CAGGAGCCTT TCTTGAGCAC
  TGAGCAATGA TGGTGAAACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss38377192	NES09710616	PERLEGEN	MM_PANEL2	f	SNP	G	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs29051748					SNP	G	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38377192	NES09710616	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:65069938 () rs orientation: forward

Symbol	Name	Function Class
Gm62074	predicted gene, 62074	1845 bp downstream
H2al1r-ps	H2A histone family member L1R, pseudogene	442 bp downstream
Tssr161126	transcription start site region 161126	836 bp downstream