ATAATAAACA AATATACTCT ATAACATATA GTTACCCTTC TAGCCCCAAA CATATAGCCT ATCTACAATT TGTCTTGGCA CACAAAGCAG ACATATATCA CAATGTATAG ACTAGCTCCA CAATACATAG ATGTAGAAAT ATGATAACCA GACATAGCCT ATGACAGAAA AACATTCTGA TAAACAAAAT TGAATTCACA Y GTACAGAGTT TCCTCAAAAT AAATGTAATT ACTCTGTAAT ATAAATGCTT TATAAGGAGA AGGTATGTTT ATCCACACAG AACTGCTGTA GGCCTCAGAC TTGGCCCATA GAATAAATAC CTATGGCATG CTCTACAAAC GACTCACCAG TCATGCCCTT TACACACAGT CTTACCCTAC AAACACTCTT GCTTCATCTG Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss38382439 | NES09719126 | PERLEGEN | MM_PANEL2 | f | SNP | C | C | C | C | C | C | C | C | C | T | C | C | T | C |
SNP Consensus Information | |||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs29054927 | SNP | C | C | C | C | C | C | C | C | C | T | C | C | T | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss38382439 | NES09719126 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: ChrX:60172576 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cdr1os | cerebellar degeneration related antigen 1, opposite strand | within coordinates | ||||||
Gm53013 | predicted gene, 53013 | within coordinates | ||||||
Tssr161073 | transcription start site region 161073 | 1010 bp downstream | ||||||
Tssr161074 | transcription start site region 161074 | 991 bp downstream | ||||||
Tssr161075 | transcription start site region 161075 | 961 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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