rs29060757 SNP Detail

Summary

• ID
  rs29060757
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:56435146 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAACAAAAAT ACATTAACAC
  AATAATTGAG AAAAAGTAAC ACCGGAGAAA GACTAACAAC TCTTTGCCTC AAGGGAAAAA
  ACAAAATTAT GTGCATGTGC ACATGTCACA TGTTTTCTGC TTAGCTGGGA GTCTGAGTTT
  GTTTTCCATT GAGCAAGAGC AAGTATGATA AGAATTCAGG ACCAGTGTCA ATTAACAAGA
  W
  TTAGACCTCC TGTAGACTAG GGAAAAGAAA AGAATGGCCT GGGTAAGCCC CAATCCTGCT
  CTTCATTTTT TTTTTTAACT TTAAGATTAT CTGGTCCATG CTTTTAACAC TGCAATTTAA
  TTTGGGCCTT CCACATCTTC CTTTCAAGTC CTGAGCACCA CACTAACAAT GTGATGAGCA
  TGGTGGGCAG TTTCCATTCA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38387880	NES09719171	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	A	T	T	T	A	T	T	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29060757					SNP	T	T	T	T	T	T	A	T	T	T	A	T	T	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38387880	NES09719171	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:56435146 () rs orientation: forward

Symbol	Name	Function Class
Rbmx	RNA binding motif protein, X chromosome	within coordinates
Rr8653	regulatory region 8653	1054 bp proximal
Rr395083	regulatory region 395083	1687 bp downstream
Snord61	small nucleolar RNA, C/D box 61	1662 bp downstream