rs29060758 SNP Detail

Summary

• ID
  rs29060758
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:56434297 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGTTACCT GTCTTTAGTG
  GAATATCCAT CATCTCTCGG GGACAAATAA ACATCTCTTC GAGAAGGCAG GGGCTCCCTT
  CGTGGCGGGC CTCCGTAACC ATCTCTTCCA CGGGACACAG GGGCTTAAGG AAAAATAAGC
  ATTAAAATCT AGCCATGGAC AAGCTACATT AGTTATACTC AGGCTATAAA AAGGGATTTA
  R
  TCGAATATGC TATGGAGCTA AGACAGGAAG CTTCCCAGTC ACATAATTTC AGTGTCTACT
  AATTATAAAT GAGATTAATC GGAATCCATC AATCAGTCTG AAGCATAAGC ATTTAAACAA
  AACATACTAC TGTGCATTTA TGGTGGGAGC ATGTGCGTGT GGTAGCGCTA ATGTGGGTCA
  GAGGACAACT CTGTAGTCAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38387883	NES09719168	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29060758					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38387883	NES09719168	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:56434297 () rs orientation: forward

Symbol	Name	Function Class
Rbmx	RNA binding motif protein, X chromosome	within coordinates
Rr8653	regulatory region 8653	1903 bp proximal
Rr395083	regulatory region 395083	838 bp downstream